MonoDevelop-Unity counts some files twice in a project of mine. This is very annoying, both for the “go to declaration” feature, and for the search (who finds twice anything who it would find).
Not every file behaves this way, only some of them. Again, no idea why.


No clue how it happened, it also happened in other projects a few months ago, and it just went away… I don’t know, weeks later? No idea what “fixed” that either.
I’ve tried to “Sync MonoDevelop Project” from Unity, and I also don’t know if it’s Unity’s fault or MonoDevelop’s.
Unity 4.6 (but it did happen with 4.3 too). MonoDevelop-Unity 4.0.1 “unity version”.
After more than two years and zero answers anywhere, I’ve finally fixed it.
Unless I’m mistaken, this disappeared after I deleted the “Release” configuration, from Mono project’s configuration.
As you can see, Release is there again, so I guess after I deleted it, it got re-created properly, or something.