I’m sorry you’ve had this issue. Please consider using proper industrial-grade source control in order to guard and protect your hard-earned work.
When you first set up source control, don’t do more than about 30 seconds of work before committing it, then clone it to a new directory (or even better a different computer) and verify you have captured 100% of the work.
Personally I use git (completely outside of Unity) because it is free and there are tons of tutorials out there to help you set it up as well as free places to host your repo (BitBucket, Github, Gitlab, etc.).
As far as configuring Unity to play nice with git, keep this in mind:
Here’s how I use git in one of my games, Jetpack Kurt:
Using fine-grained source control as you work to refine your engineering:
Share/Sharing source code between projects:
Setting up the right .gitignore file:
Generally setting Unity up (includes above .gitignore concepts):
It is only simple economics that you must expend as much effort into backing it up as you feel the work is worth in the first place.
“Use source control or you will be really sad sooner or later.” - StarManta on the Unity3D forum boards